If you're Qlik Sense Desktop, you can't move where you place the QVFs, but the other files can be in other folders just like QlikView. You can make Data connections to those folder locations.
Below is a link to some very helpful videos and information. I would suggest reviewing them and you have any other questions or concerns we will be more than happy to try to answer them.
Please mark the appropriate replies as helpful / correct so our team and other members know that your question(s) has been answered to your satisfaction.