Have you allocated Document CALs to each individual document in QMC > Documents > User Documents > QVWName.qvw > Document CALs tab > Number of CALs allocated to this document field?
After Doc CALs have been allocated to the QVW, then you can select to manually assign them to specific users or select to dynamically assign them.
Hope this helps
Chip (wmy) and I found the answer.
I had the application's folder mounted twice at different levels. QlikView stores the application as its mounted folder path rather than it's absolute folder path. So while I was allocating CALs to the document, AccessPoint was directing the users to the duplicate document, which did not have any CALs assigned.