I can't open you app currently. but, for sure will help you once i get access. Meantime, Few quick questions?
1) Custom point and area data shows properly?
2) Have you download from 3rd part s/w which called Keywhole ?
3) The boundaries are in single cell by delimit " ; " or is has from Long and Latitudes?
1 Custom points may be correct , but area points are wrongly showing
2 download KML file for India -Level 3 (District) from Download | Global Administrative Areas
3 Boundaries are in KML I think it is by Comma
2) Which format, You pick
3) Could be cause, can this done using Longitude and Latitude separate like New polygon and New Placemark (If accuracy to each Long and Latitude of each moment to separate custom data points). That is the reason they are using custom down-loader. That may be the issue we are under? Need to trouble shoot that. Can you work on Google earth for a while instead GAA. That makes good bright for you this case.